Bangkok, Thailand | AFP | Muser NewsDesk

A decade-long study tracking dozens of whale sharks off Indonesia’s coast has revealed the secrets of their migrations and two hotspots where they gather year-round.

The research published Thursday fills in critical gaps in knowledge about the endangered species, and builds the case for increased protection of the Indonesian bays that the species flocks to, scientists said.

Whale sharks, which are a type of shark, not whale, face threats including pollution, tourism and vessel strikes.

While their speckled skin and stunning size make them instantly recognisable and a tourist draw, little was known about how the species moved between well-established gathering points.

Researchers in Indonesia aimed to change that by tagging Indo-Pacific whale sharks, which represent about 60 percent of the species, and tracing their movements.

Image: Fig 1 - 'Integrating behavioral movement and environmental preferences to map critical habitat of whale sharks using long-term satellite tracking in the Indo-Pacific Ocean'
Behavioral states of 64 whale sharks were classified using the move persistence index (γ), where γ < 0.55 indicates area-restricted search (foraging; green) and γ > 0.55 indicates migratory (migrating; yellow). The dotted lines indicate Exclusive Economic Zones (Flanders Marine Institute, 2023). Credit: Putra et al. (2026) | DOI: 10.3389/fmars.2026.1808805 | Frontiers in Marine Science | CC BY

Over a decade, they tagged 70 whale sharks at sites in Indonesia. Some were tracked for nearly three years.

“We could actually map or identify many variations of whale shark movement,” said Mochamad Iqbal Herwata Putra, the study’s lead author.

“The whale sharks that we tagged moved through (waters of) 13 different countries as well as the high seas,” he told AFP.

The research, published in the Frontiers in Marine Science journal, also revealed that two bays in Indonesia host whale sharks year-round, rather than seasonally as previously thought.

“This is very unique,” said Putra, focal species conservation senior manager at NGO Konservasi Indonesia.

While most “aggregation sites” for whale sharks are believed to be seasonal gathering points, Cenderawasih Bay off Indonesia’s Papua province and Saleh Bay in Sumbawa are “like home for them”, Putra said.

A combination of protection from predators and high availability of food such as krill make the bays crucial hotspots, with some evidence they may also function as nurseries.

Cenderawasih Bay is already protected as a national park, and its remote location has helped temper mass tourism.

But Saleh Bay is both popular with visitors and in a region with growing corn production on land and aquaculture at sea.

Both these industries can produce pollution — include pesticide runoff and sedimentation — that impacts water quality and whale sharks.

Putra noted that Indonesia recorded dozens of whale shark strandings in recent years. Pollution and interactions with fishing vessels are believed to be among the causes.

Konservasi Indonesia is working with the government to establish the country’s first whale shark-specific marine protected area in Saleh Bay, which Putra said he hoped would come into effect this year.

sah/lga

© Agence France-Presse

Journal Reference:
Putra MIH, Wirasatriya A, Sianipar A, Hasan A, Setyawan E, Syakurachman I, Mambrasar R, Erdmann M, Supriatna J and Manessa MDM, ‘Integrating behavioral movement and environmental preferences to map critical habitat of whale sharks using long-term satellite tracking in the Indo-Pacific Ocean’, Frontiers in Marine Science 13: 1808805 (2026). DOI: 10.3389/fmars.2026.1808805

Article Source:
Press Release/Material by AFP
Featured image credit: Sebastian Pena Lambarri | Unsplash

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